Package: phacking 0.2.1

Peter Solymos

phacking: Sensitivity Analysis for p-Hacking in Meta-Analyses

Fits right-truncated meta-analysis (RTMA), a bias correction for the joint effects of p-hacking (i.e., manipulation of results within studies to obtain significant, positive estimates) and traditional publication bias (i.e., the selective publication of studies with significant, positive results) in meta-analyses [see Mathur MB (2022). "Sensitivity analysis for p-hacking in meta-analyses." <doi:10.31219/osf.io/ezjsx>.]. Unlike publication bias alone, p-hacking that favors significant, positive results (termed "affirmative") can distort the distribution of affirmative results. To bias-correct results from affirmative studies would require strong assumptions on the exact nature of p-hacking. In contrast, joint p-hacking and publication bias do not distort the distribution of published nonaffirmative results when there is stringent p-hacking (e.g., investigators who hack always eventually obtain an affirmative result) or when there is stringent publication bias (e.g., nonaffirmative results from hacked studies are never published). This means that any published nonaffirmative results are from unhacked studies. Under these assumptions, RTMA involves analyzing only the published nonaffirmative results to essentially impute the full underlying distribution of all results prior to selection due to p-hacking and/or publication bias. The package also provides diagnostic plots described in Mathur (2022).

Authors:Peter Solymos [cre, ctb], Maya Mathur [aut], Mika Braginsky [aut]

phacking_0.2.1.tar.gz
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manual.pdf |manual.html
DESCRIPTION |NEWS
card.svg |card.png
phacking/json (API)

# Install 'phacking' in R:
install.packages('phacking', repos = c('https://mathurlabstanford.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/mathurlabstanford/phacking/issues

Pkgdown/docs site:https://mathurlabstanford.github.io

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:

On CRAN:

Conda:

cpp

3.00 score 1 stars 10 scripts 263 downloads 4 exports 63 dependencies

Last updated from:c5cc0ed243. Checks:12 OK, 1 FAIL. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK282
linux-devel-x86_64OK343
source / vignettesOK279
linux-release-arm64OK272
linux-release-x86_64OK291
macos-release-arm64OK255
macos-release-x86_64OK795
macos-oldrel-arm64OK228
macos-oldrel-x86_64OK581
windows-develOK350
windows-releaseOK327
windows-oldrelOK353
wasm-releaseFAIL195

Exports:phacking_metartma_cdfrtma_qqplotz_density

Dependencies:abindbackportsBHcallrcheckmateclicpp11descdigestdistributionaldplyrfarvergenericsggplot2gluegridExtragtableinlineisobandlabelinglatticelifecycleloomagrittrmathjaxrMatrixmatrixStatsmetabiasmetadatmetafornlmenumDerivotelpbapplypillarpkgbuildpkgconfigposteriorprocessxpspurrrQuickJSRR6rbibutilsRColorBrewerRcppRcppEigenRcppParallelRdpackrlangrstanrstantoolsS7scalesStanHeaderstensorAtibbletidyselecttruncnormutf8vctrsviridisLitewithr